Publications with

Below you find a list of selected publications that were published with the help of our microscopes and dyes.

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Year Journal Author Title Microscope|Dye
2017 Chemistry Butkevich, A. N., et al. Hydroxylated Fluorescent Dyes for Live‐Cell Labeling: Synthesis, Spectra and Super‐Resolution STED
2017 Scientific reports Popovic, Z. V., et al. Hyperosmolarity impedes the cross-priming competence of dendritic cells in a TRIF-dependent manner
2017 Scientific reports Chmyrov, A., et al. Achromatic light patterning and improved image reconstruction for parallelized RESOLFT nanoscopy
2017 Nature protocols Chamma, I., et al. Optimized labeling of membrane proteins for applications to super-resolution imaging in confined cellular environments using monomeric streptavidin
2017 Proceedings of the National Academy of Sciences Göttfert, F., et al. Strong signal increase in STED fluorescence microscopy by imaging regions of subdiffraction extent
2017 Cell reports Cortese, M., et al. Ultrastructural characterization of Zika virus replication factories
2017 Biochimica et Biophysica Acta (BBA)-Molecular Cell Research Maldonado, H., et al. Astrocyte-to-neuron communication through integrin-engaged Thy-1/CBP/Csk/Src complex triggers neurite retraction via the RhoA/ROCK pathway
2017 Scientific reports Reindl, J., et al. Chromatin organization revealed by nanostructure of irradiation induced γH2AX, 53BP1 and Rad51 foci
2017 Proceedings of the National Academy of Sciences D’Este, E., et al. Ultrastructural anatomy of nodes of Ranvier in the peripheral nervous system as revealed by STED microscopy
2017 In Super-Resolution Microscopy (pp. 29-44). Humana Press Klauss, A., et al. Diffraction-Unlimited Fluorescence Imaging with an EasySTED Retrofitted Confocal Microscope
2017 Science Balzarotti, F., et al. Nanometer resolution imaging and tracking of fluorescent molecules with minimal photon fluxes
2016 Nature communications Johlin, E., et al. Super-resolution imaging of light–matter interactions near single semiconductor nanowires
2016 Immunobiology Mazkereth, N., et al. Complement triggers relocation of Mortalin/GRP75 from mitochondria to the plasma membrane
2016 Scientific reports Bär, J., et al. Periodic F-actin structures shape the neck of dendritic spines
2016 ACS nano Cortes, E., et al. Plasmonic nanoprobes for stimulated emission depletion nanoscopy
2016 Angewandte Chemie International Edition Roubinet, B., et al. Carboxylated photoswitchable diarylethenes for biolabeling and super‐resolution RESOLFT microscopy
2016 Journal of structural biology Benda, A., et al. STED imaging of tau filaments in Alzheimer’s disease cortical grey matter
2016 BMC Zoology Rodrigues, M., et al. The cellular basis of bioadhesion of the freshwater polyp Hydra
2016 ACS nano Hanne, J., et al. Stimulated emission depletion nanoscopy reveals time-course of human immunodeficiency virus proteolytic maturation
2016 Scientific reports Lo, C. Y. W., et al. Novel super-resolution capable mitochondrial probe, MitoRed AIE, enables assessment of real-time molecular mitochondrial dynamics
2016 Journal of Biological Chemistry Galiani, S., et al. Super-resolution microscopy reveals compartmentalization of peroxisomal membrane proteins
2016 Chemistry Nizamov, S., et al. “Reduced” coumarin dyes with an O-phosphorylated 2, 2-dimethyl-4-(hydroxymethyl)-1, 2, 3, 4-tetrahydroquinoline fragment: Synthesis, spectra, and STED microscopy
2016 Elife Schnorrenberg, S., et al. In vivo super-resolution RESOLFT microscopy of Drosophila melanogaster
2016 Biophysical journal Steshenko, O., et al. Reorganization of lipid diffusion by myelin basic protein as revealed by STED nanoscopy
2016 EMBO reports Agostinho, A., et al. High density of REC 8 constrains sister chromatid axes and prevents illegitimate synaptonemal complex formation
2016 Scientific reports Batoulis, H., et al. Concentration dependent ion-protein interaction patterns underlying protein oligomerization behaviours
2016 Journal of Biological Chemistry Milovanovic, D., et al. Calcium promotes the formation of syntaxin 1 mesoscale domains through phosphatidylinositol 4, 5-bisphosphate
2016 PloS one Mlodzianoski, M. J., et al. Super-resolution imaging of molecular emission spectra and single molecule spectral fluctuations
2016 In Multiphoton Microscopy in the Biomedical Sciences XVI (Vol. 9712) Koenig, M., et al. ns-time resolution for multispecies STED-FLIM and artifact free STED-FCS
2016 Scientific reports D’Este, E., et al. Subcortical cytoskeleton periodicity throughout the nervous system
2016 Nature communications Bottanelli, F., et al. Two-colour live-cell nanoscale imaging of intracellular targets
2016 Journal of the American Chemical Society Aloi, A., et al. Imaging nanostructures by single-molecule localization microscopy in organic solvents
2016 Angewandte Chemie International Edition Butkevich, A. N., et al. Fluorescent rhodamines and fluorogenic carbopyronines for super‐resolution STED microscopy in living cells
2016 Nature methods Niehörster, T., et al. Multi-target spectrally resolved fluorescence lifetime imaging microscopy
2016 The EMBO journal Große, L., et al. Bax assembles into large ring‐like structures remodeling the mitochondrial outer membrane in apoptosis
2015 The EMBO journal Johnson, A., et al. TFG clusters COPII‐coated transport carriers and promotes early secretory pathway organization
2015 Optics express Curdt, F., et al. isoSTED nanoscopy with intrinsic beam alignment
2015 Optics letters Velasco, M. G. M., et al. Absolute two-photon excitation spectra of red and far-red fluorescent probes
2015 ACS nano Vreja, I. C., et al. Super-resolution microscopy of clickable amino acids reveals the effects of fluorescent protein tagging on protein assemblies
2015 Chemistry Boott, C. E., et al. In Situ Visualization of Block Copolymer Self‐Assembly in Organic Media by Super‐Resolution Fluorescence Microscopy
2015 Nature communications Muhammad, K., et al. Presynaptic spinophilin tunes neurexin signalling to control active zone architecture and function
2015 Methods Clausen, M. P., et al. A straightforward approach for gated STED-FCS to investigate lipid membrane dynamics
2015 Journal of Experimental Medicine Nevius, E., et al. Oxysterols and EBI2 promote osteoclast precursor migration to bone surfaces and regulate bone mass homeostasis
2015 Nature communications Lukinavičius, G., et al. SiR–Hoechst is a far-red DNA stain for live-cell nanoscopy
2015 Scientific reports Wu, Y., et al. Resonant scanning with large field of view reduces photobleaching and enhances fluorescence yield in STED microscopy
2015 Autophagy Prado, M., et al. Long-term live imaging reveals cytosolic immune responses of host hepatocytes against Plasmodium infection and parasite escape mechanisms
2015 PloS one Ilgen, P., et al. Resolft nanoscopy of fixed cells using a z-domain based fusion protein for labelling
2015 PLoS computational biology Ullrich, A., et al. Dynamical organization of syntaxin-1A at the presynaptic active zone
2015 The Journal of chemical physics Stéphane Bancelin, et al. Counting tagged molecules one by one: Quantitative photoactivation and bleaching of photoactivatable fluorophores
2015 Proceedings of the National Academy of Sciences Kukat, C., et al. Cross-strand binding of TFAM to a single mtDNA molecule forms the mitochondrial nucleoid
2015 ACS nano Duwé, S., et al. Expression-enhanced fluorescent proteins based on enhanced green fluorescent protein for super-resolution microscopy
2015 Elife Siebert, M., et al. A high affinity RIM-binding protein/Aplip1 interaction prevents the formation of ectopic axonal active zones
2015 Chemistry Kolmakov, K., et al. Far-red emitting fluorescent dyes for optical nanoscopy: Fluorinated silicon–rhodamines (SiRF dyes) and phosphorylated oxazines
2015 Journal of microscopy Koho, S., et al. A software tool for tomographic axial superresolution in STED microscopy
2015 Chemical Communications Kabatas, S., et al. A contamination-insensitive probe for imaging specific biomolecules by secondary ion mass spectrometry
2015 Nature methods König, I., et al. Single-molecule spectroscopy of protein conformational dynamics in live eukaryotic cells
2015 Nature neuroscience Schachtrup, C., et al. Nuclear pore complex remodeling by p75NTR cleavage controls TGF-β signaling and astrocyte functions
2015 Journal of neurochemistry Tam, J., et al. Stochastic optical reconstruction microscopy (STORM) in comparison with stimulated emission depletion (STED) and other imaging methods
2015 Plos one Klauss, A., et al. Upgrade of a scanning confocal microscope to a single-beam path STED microscope
2015 Applied optics Wang, Y., et al. Dual-mode super-resolution imaging with stimulated emission depletion microscopy and fluorescence emission difference microscopy
2015 Optics letters Han, K. Y., et al. Dual-color three-dimensional STED microscopy with a single high-repetition-rate laser
2015 Nature methods Galland, R., et al. 3D high- and super-resolution imaging using single-objective SPIM
2015 In CLEO: Science and Innovations Yan, L., et al. Single-aperture STED illumination using a q-plate and fiber
2015 Frontiers in cellular neuroscience Pukaß, K., et al. Inhibition of UCH-L1 in oligodendroglial cells results in microtubule stabilization and prevents α-synuclein aggregate formation by activating the autophagic pathway: Implications for multiple system atrophy
2015 The Journal of Immunology Enqvist, M., et al. Coordinated expression of DNAM-1 and LFA-1 in educated NK cells
2015 Contemporary Physics Weisenburger, S., et al. Light microscopy: an ongoing contemporary revolution
2015 The EMBO journal Ivanova, D., et al. Synaptic activity controls localization and function of CtBP1 via binding to Bassoon and Piccolo
2015 Annual Review of Statistics and Its Application Aspelmeier, T., et al. Modern statistical challenges in high-resolution fluorescence microscopy
2015 Angewandte Chemie International Edition Vreja, I. C., et al. Secondary‐Ion Mass Spectrometry of Genetically Encoded Targets
2015 In Three-Dimensional and Multidimensional Microscopy: Image Acquisition and Processing XXII (Vol. 9330 Deguchi, T., et al. Tomographic STED microscopy to study bone resorption
2015 Cell reports D’Este, E., et al. STED nanoscopy reveals the ubiquity of subcortical cytoskeleton periodicity in living neurons
2015 Cell reports Kehrein, K., et al. Organization of mitochondrial gene expression in two distinct ribosome-containing assemblies
2015 Nature communications Fidzinski, P., et al. KCNQ5 K+ channels control hippocampal synaptic inhibition and fast network oscillations
2015 Journal of Biological Chemistry Jonas, K. C., et al. Single Molecule Analysis of Functionally Asymmetric G Protein-coupled Receptor (GPCR) Oligomers Reveals Diverse Spatial and Structural Assemblies
2015 Optics express Bergermann, F., et al. 2000-fold parallelized dual-color STED fluorescence nanoscopy
2015 Chemical senses Henkel, B., et al. Co-expression of anoctamins in cilia of olfactory sensory neurons
2014 In Nuclear Bodies and Noncoding RNAs. Humana Press Okada, Y., et al. Super-resolution imaging of nuclear bodies by STED microscopy
2015 European Journal of Organic Chemistry Mitronova, G., et al. Functionalization of the meso-phenyl ring of rhodamine dyes through SNAr with sulfur nucleophiles: Synthesis, biophysical characterizations, and comprehensive NMR analysis
2014 Nature communications Honigmann, A., et al. Scanning STED-FCS reveals spatiotemporal heterogeneity of lipid interaction in the plasma membrane of living cells
2014 Advanced drug delivery reviews Lauer, F. M., et al. Single molecule microscopy in 3D cell cultures and tissues
2014 Nature methods Hua, B., et al. An improved surface passivation method for single-molecule studies
2014 Journal of biomedical optics Chacko, J. V., et al. Cellular level nanomanipulation using atomic force microscope aided with superresolution imaging
2014 Chemistry Belov, V. N., et al. Masked rhodamine dyes of five principal colors revealed by photolysis of a 2-diazo-1-indanone caging group: synthesis, photophysics, and light microscopy applications
2014 Biophysical journal Bosch, P. J., et al. Evaluation of fluorophores to label SNAP-tag fused proteins for multicolor single-molecule tracking microscopy in live cells
2014 Microscopy research and technique Wang, Y., et al. A 3D aligning method for stimulated emission depletion microscopy using fluorescence lifetime distribution
2014 Molecular biology of the cell Lavieu, G., et al. The Golgi ribbon structure facilitates anterograde transport of large cargoes
2014 Nature communications Saka, S. K., et al. Multi-protein assemblies underlie the mesoscale organization of the plasma membrane
2014 Journal of Modern Optics Rong, Z., et al. Real-time super-resolution imaging by high-speed fluorescence emission difference microscopy
2014 Methods in cell biology Engel, U., et al. Structured illumination superresolution imaging of the cytoskeleton
2014 Journal of Neuroscience Li, L., et al. Drosophila Syd-1, liprin-α, and protein phosphatase 2A B′ subunit Wrd function in a linear pathway to prevent ectopic accumulation of synaptic materials in distal axons
2014 Progress In Electromagnetics Research Görlitz, F., et al. A STED microscope designed for routine biomedical applications
2014 PloS one Koch, N., et al. Terminal axonal arborization and synaptic bouton formation critically rely on abp1 and the arp2/3 complex
2014 BMC neuroscience Westin, L., et al. Nanoscopic spine localization of Norbin, an mGluR5 accessory protein
2014 In Journal of Physics: Conference Series Vedyaykin, A. D., et al. Localization microscopy study of FtsZ structures in E. coli cells during SOS-response
2014 Elife Honigmann, A., et al. A lipid bound actin meshwork organizes liquid phase separation in model membranes
2014 Scientific reports Eggert, D., et al. Nanoscale glucan polymer network causes pathogen resistance
2014 PloS one Hughes, L. D., et al. Choose your label wisely: water-soluble fluorophores often interact with lipid bilayers
2014 PloS one Tobin, S. J., et al. Nanoscale effects of ethanol and naltrexone on protein organization in the plasma membrane studied by photoactivated localization microscopy (PALM)
2014 eLife Wilfling, F., et al. Arf1/COPI machinery acts directly on lipid droplets and enables their connection to the ER for protein targeting
2014 In Fundamentals of Fluorescence Microscopy. Springer, Dordrecht. Mondal, P. P., et al. Super-resolution fluorescence microscopy
2013 Chemistry Kolmakov, K., et al. Polar red-emitting rhodamine dyes with reactive groups: synthesis, photophysical properties, and two-color STED nanoscopy applications
2013 Nature methods Marx, V., et al. Is super-resolution microscopy right for you?
2013 Chemistry Schill, H., et al. 4-Trifluoromethyl-substituted coumarins with large Stokes shifts: synthesis, bioconjugates, and their use in super-resolution fluorescence microscopy
2013 Cell host & microbe Wang, I. H., et al. Tracking viral genomes in host cells at single-molecule resolution
2013 NanoBioImaging Clausen, M. P., et al. Pathways to optical STED microscopy
2013 Optical Engineering Wang, Y., et al. Time-gated stimulated emission depletion nanoscopy
2013 Cytoskeleton Chacko, J. V., et al. Probing cytoskeletal structures by coupling optical superresolution and AFM techniques for a correlative approach
2013 PloS one Blom, H., et al. Spatial distribution of DARPP-32 in dendritic spines
2013 In International Symposium on Photoelectronic Detection and Imaging 2013: Micro/Nano Optical Imaging Technologies and Applications Li, S., et al. High speed optical nanoscopy by stimulated emission depletion (STED) with galvo mirrors
2013 Biophysical journal Göttfert, F., et al. Coaligned dual-channel STED nanoscopy and molecular diffusion analysis at 20 nm resolution
2013 Proceedings of the National Academy of Sciences Jans, D. C., et al. STED super-resolution microscopy reveals an array of MINOS clusters along human mitochondria
2013 Biomedical optics express Olivier, N., et al. Simple buffers for 3D STORM microscopy
2013 Nature structural & molecular biology Honigmann, A., et al. Phosphatidylinositol 4, 5-bisphosphate clusters act as molecular beacons for vesicle recruitment
2013 Israel Journal of Chemistry Belov, V. N., et al. Photoswitching Emission with Rhodamine Spiroamides for Super‐resolution Fluorescence nanoscopies
2013 Bioconjugate chemistry Sednev, M. V., et al. Carborhodol: a new hybrid fluorophore obtained by combination of fluorescein and carbopyronine dye cores
2013 JOSA A Xie, H., et al. Analytical description of high-aperture STED resolution with 0–2π vortex phase modulation
2012 Elife Grotjohann, T., et al. rsEGFP2 enables fast RESOLFT nanoscopy of living cells
2013 Journal of molecular and cellular cardiology Kohl, T., et al. Superresolution microscopy in heart—Cardiac nanoscopy
2012 Chemistry Nizamov, S., et al. Phosphorylated 3-heteroarylcoumarins and their use in fluorescence microscopy and nanoscopy
2012 Science Chojnacki, J., et al. Maturation-dependent HIV-1 surface protein redistribution revealed by fluorescence nanoscopy
2012 Development Giese, A. P., et al. Gipc1 has a dual role in Vangl2 trafficking and hair bundle integrity in the inner ear
2012 PloS Pathogens Karlsson, T., et al. The Pseudomonas aeruginosa N-acylhomoserine lactone quorum sensing molecules target IQGAP1 and modulate epithelial cell migration
2012 Optical Nanoscopy Wurm, C. A., et al. Novel red fluorophores with superior performance in STED microscopy
2012 Chemistry Kolmakov, K., et al. Red-emitting rhodamines with hydroxylated, sulfonated, and phosphorylated dye residues and their use in fluorescence nanoscopy
2012 The Journal of Physical Chemistry Letters Zhu, X., et al. Molecular-switch-mediated multiphoton fluorescence microscopy with high-order nonlinearity
2012 Biochimica et Biophysica Acta (BBA)-Biomembranes Sezgin, E., et al. Partitioning, diffusion, and ligand binding of raft lipid analogs in model and cellular plasma membranes
2012 ACS nano Balzarotti, F., et al. Plasmonics meets far-field optical nanoscopy
2013 Faraday Discussions Honigmann, A., et al. STED microscopy detects and quantifies liquid phase separation in lipid membranes using a new far-red emitting fluorescent phosphoglycerolipid analogue
2012 ChemPhysChem Müller, T., et al. STED microscopy and its applications: new insights into cellular processes on the nanoscale
2012 Science Berning, S., et al. Nanoscopy in a living mouse brain
2011 Proceedings of the National Academy of Sciences Kukat, C., et al. Super-resolution microscopy reveals that mammalian mitochondrial nucleoids have a uniform size and frequently contain a single copy of mtDNA
2011 Proceedings of the National Academy of Sciences Wurm, C. A., et al. Nanoscale distribution of mitochondrial import receptor Tom20 is adjusted to cellular conditions and exhibits an inner-cellular gradient
2011 Nature methods Vicidomini, G., et al. Sharper low-power STED nanoscopy by time gating
2011 Journal of Neuroscience Reisinger, E., et al. Probing the functional equivalence of otoferlin and synaptotagmin 1 in exocytosis
2010 Angewandte Chemie International Edition Belov, V. N., et al. Rhodamines NN: a novel class of caged fluorescent dyes
2010 Chemistry Mitronova, G. Y., et al. New fluorinated rhodamines for optical microscopy and nanoscopy
2010 PMC biophysics Neumann, D., et al. Two-color STED microscopy reveals different degrees of colocalization between hexokinase-I and the three human VDAC isoforms
2010 Chemistry Kolmakov, K., et al. Red-emitting rhodamine dyes for fluorescence microscopy and nanoscopy
2009 Chemistry Belov, V. N., et al. Rhodamine Spiroamides for Multicolor Single‐Molecule Switching Fluorescent Nanoscopy
2009 European Journal of Organic Chemistry Polyakova, S., et al. New GM1 ganglioside derivatives for selective single and double labelling of the natural glycosphingolipid skeleton
2009 Nano letters Schmidt, R., et al. Mitochondrial cristae revealed with focused light
2009 Nature Eggeling, C., et al. Direct observation of the nanoscale dynamics of membrane lipids in a living cell
2008 Nano letters Bossi, M., et al. Multicolor far-field fluorescence nanoscopy through isolated detection of distinct molecular species
2008 ChemPhysChem Fölling, J., et al. Fluorescence nanoscopy with optical sectioning by two‐photon induced molecular switching using continuous‐wave lasers
2018 In Neurotrophic Factors (pp. 295-314). Humana Press Gobbo, F., et al. Site-specific direct labeling of neurotrophins and their receptors: From biochemistry to advanced imaging applications
2007 Angewandte Chemie International Edition Fölling, J., et al. Photochromic rhodamines provide nanoscopy with optical sectioning
2007 Science Hell, S. W., et al. Far-field optical nanoscopy
2003 Nature biotechnology Dyba, M., et al. Immunofluorescence stimulated emission depletion microscopy
2023 Cell Déjosez, M., et al. Bat pluripotent stem cells reveal unusual entanglement between host and viruses
2023 Science Direct Li, R., et al. Discriminating between different proteins in the microstructure of acidified milk gels by super-resolution microscopy
2022 Cellular and Molecular Life Sciences Saha, K., et al. Pharmacological chaperone-rescued cystic fibrosis CFTR-F508del mutant overcomes
2023 Food Hydrocolloids Foroutanparsa, S. , et al. Spatial distribution of αs1-caseins and β-caseins in milk gels acidified with glucono-δ-lactone